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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885526.1_cds_XP_016439546.1_35091
CDS Infomation

[gene=LOC107765419] [db_xref=GeneID:107765419] [protein=CSC1-like protein At4g02900] [partial=3'] [protein_id=XP_016439546.1] [location=complement(join(<68..486,1147..1392,2136..2476,3543..3623,3755..3874,4093..4194,4281..4416,4815..4964,5158..5471))] [gbkey=CDS]
Sequence

ATGGCTAGCAGTGATGATATTCTTCTGTCAGCTGTGCTCAATCTTCTATCTGCATTTGCA
TTTCTTGTGGCCTTTGCTATTCTACGACTCCAGCCATTCAATGACAGAGTGTACTTCTCA
AAATGGTATCTGAAGGGAATACGAGCAAGCCCAAGAAGTTCCGGAGCATTTGTGAGGAAA
TTTGTCAACTTGGATTGCAGAACATACATAAGGTTCCTGAATTGGATGCCTGCAGCTCTA
AGAATGCCAGAACCAGAGCTTATCGATCATGCTGGTCTTGATTCTGCTGTCTATATACGG
ATATACCTTCTTGGATTGAAAATCTTTGTTCCTATTGCACTATTTTCATTTGGGGTTTTA
GTGCCTGTCAATTGGACTGGGAAACATTTGGAGCAAATTGAGGATCTTACATTCAGCGGT
ATCGATAAACTTTCGATATCCAATGTCCCTTCTGGATCACAGAGGTTTTGGGCACACCTG
GTAATGGCTTATGCAGTCACGTTTTGGACCTGCTATATACTATACAAAGAATATCATATA
ATATCAACCATGAGGCTGCAGTTTCTTGCCTCTGAAAATCGTCGGCCTGATCAGTTAACT
GTCCTTGTGAGAAATGTTCCTCCAGATCCAGATGAATCAGTGAGCGAGCATGTTGAACAT
TTCTTTTGCGTGAATCATCCAGATCATTATCTAACACACCAGGTTGTTTACAATGCAAAT
AATCTAGCTAAATTGGTGGAAAAGAAGAAGAGCTATCAAAATTGGCTTACATACTACCAA
ACTAAGTATGAGAGAAACCCTAAGATTAAGCCAAAGACGAAGACAGGGTTTTGGGGCCTT
TGGGGAAAAACTGTGGACGCCATTGATTATTATACCGCTGAAATTGAGAAGTTGAGTAAA
GAAGAAGCTTTAGAAAGAGAAAAAGTTATGAGTGATCCCAAGGCAATAGTTCCTGCAGCA
TTTGTTTCATTTAAATCTCGTTGGGGAGCGGCTGTCTGTGCTCAAACACAACAATCATGT
AACCCAACCATTTGGTTGACACAATGGGCTCCTGAACCACGTGATGTCTATTGGGATAAT
CTATCAATACCATATGTTGAACTCAATGTCCGCAAACTGCTAATGGCTGTTGCTTTCTTC
TTTCTTACATTCTTTTTTATGATCCCTATTGCATTCGTTCAGTCTTTGGCAAGCATTGAT
GGTATTGAGAATAAACTTCCCGTCTTGAGGCCGTTGATACAGATGGAAGTTGTCAAATCT
TTTATCCAAGGTGTTCTTCCTGGGATTATACTGAAGATTTTTCTGATTCTTCTTCCTACG
ATTCTAATGGCCATGTCAAAAATAGAAGGCTATACATCACTTTCATCTTTGGACAGAAGA
TCAGCAACTAAATATCATTTTTTTATCCTTGTCAACGTGTTCCTGGGAAGTATCATCACT
GGAGCAGCATTTGAGCAGCTACAGAGATTTGTGGAAGAGCCTCCATCAGAAATCCCAAAA
ACAGTTGGTGTAGCTATTCCGTTGAAGGCTACTTTCTTCATTACCTACATAATGGTTGAT
GGTTGGGCTGGAATTGCTGCAGAGATTCTTAGATTGGTTCCATTAGTTATGTTTCATCTT
AAGAATACGTTTCTGGTAAAGACAGATCAGGATAGAGAGCAGGCTACAGATCCTGGTTCG
TTGAATTTCTCTGTATCAGAACCTCGCATACAACTGTACTTTCTACTAGGCCTTGTGTAC
TCAGTGGTCACACCCGTACTCCTGCCTTTCATCATAGTCTTCTTCGCATTTGCTTATATG
GTTTTCCGTCATCAGGTATTTCACTATTGCTTATGCAACAGATGTTTAGATATCTTGTTG
AGAAGGTGCAAAGACGAGATGCATGATAAATGCTTAAAAGCGATGGAAC

Peptide Sequence

PEP ID

XP_016439546.1
PEP Infomation

PREDICTED: CSC1-like protein At4g02900, partial [Nicotiana tabacum]
Sequence

MASSDDILLSAVLNLLSAFAFLVAFAILRLQPFNDRVYFSKWYLKGIRASPRSSGAFVRK
FVNLDCRTYIRFLNWMPAALRMPEPELIDHAGLDSAVYIRIYLLGLKIFVPIALFSFGVL
VPVNWTGKHLEQIEDLTFSGIDKLSISNVPSGSQRFWAHLVMAYAVTFWTCYILYKEYHI
ISTMRLQFLASENRRPDQLTVLVRNVPPDPDESVSEHVEHFFCVNHPDHYLTHQVVYNAN
NLAKLVEKKKSYQNWLTYYQTKYERNPKIKPKTKTGFWGLWGKTVDAIDYYTAEIEKLSK
EEALEREKVMSDPKAIVPAAFVSFKSRWGAAVCAQTQQSCNPTIWLTQWAPEPRDVYWDN
LSIPYVELNVRKLLMAVAFFFLTFFFMIPIAFVQSLASIDGIENKLPVLRPLIQMEVVKS
FIQGVLPGIILKIFLILLPTILMAMSKIEGYTSLSSLDRRSATKYHFFILVNVFLGSIIT
GAAFEQLQRFVEEPPSEIPKTVGVAIPLKATFFITYIMVDGWAGIAAEILRLVPLVMFHL
KNTFLVKTDQDREQATDPGSLNFSVSEPRIQLYFLLGLVYSVVTPVLLPFIIVFFAFAYM
VFRHQVFHYCLCNRCLDILLRRCKDEMHDKCLKAME

Transcript Sequence

Gene sequence data has not been registered.